MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Nostoc sp. PCC 7120 plasmid pCC7120epsilon

Total Repeats: 169

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_003270	TAA	2	6	96	101	66.67 %	33.33 %	0 %	0 %	Non-Coding
2	NC_003270	T	6	6	126	131	0 %	100 %	0 %	0 %	Non-Coding
3	NC_003270	ATAC	2	8	178	185	50 %	25 %	0 %	25 %	Non-Coding
4	NC_003270	CTT	2	6	227	232	0 %	66.67 %	0 %	33.33 %	Non-Coding
5	NC_003270	TA	3	6	278	283	50 %	50 %	0 %	0 %	Non-Coding
6	NC_003270	ACA	2	6	317	322	66.67 %	0 %	0 %	33.33 %	Non-Coding
7	NC_003270	CTA	2	6	326	331	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_003270	CTG	2	6	485	490	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
9	NC_003270	TCT	2	6	577	582	0 %	66.67 %	0 %	33.33 %	Non-Coding
10	NC_003270	T	6	6	614	619	0 %	100 %	0 %	0 %	Non-Coding
11	NC_003270	ATT	2	6	650	655	33.33 %	66.67 %	0 %	0 %	Non-Coding
12	NC_003270	CAA	2	6	692	697	66.67 %	0 %	0 %	33.33 %	Non-Coding
13	NC_003270	ACC	2	6	714	719	33.33 %	0 %	0 %	66.67 %	Non-Coding
14	NC_003270	TCA	2	6	744	749	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
15	NC_003270	ATC	2	6	778	783	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
16	NC_003270	CA	3	6	800	805	50 %	0 %	0 %	50 %	Non-Coding
17	NC_003270	CAC	2	6	814	819	33.33 %	0 %	0 %	66.67 %	Non-Coding
18	NC_003270	T	7	7	839	845	0 %	100 %	0 %	0 %	Non-Coding
19	NC_003270	AT	3	6	855	860	50 %	50 %	0 %	0 %	Non-Coding
20	NC_003270	ATG	2	6	876	881	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
21	NC_003270	TAG	2	6	928	933	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
22	NC_003270	A	6	6	957	962	100 %	0 %	0 %	0 %	Non-Coding
23	NC_003270	TAA	2	6	968	973	66.67 %	33.33 %	0 %	0 %	Non-Coding
24	NC_003270	ACC	2	6	986	991	33.33 %	0 %	0 %	66.67 %	Non-Coding
25	NC_003270	TAA	2	6	1032	1037	66.67 %	33.33 %	0 %	0 %	Non-Coding
26	NC_003270	ATG	2	6	1152	1157	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
27	NC_003270	AGTG	2	8	1182	1189	25 %	25 %	50 %	0 %	Non-Coding
28	NC_003270	GGGT	2	8	1243	1250	0 %	25 %	75 %	0 %	Non-Coding
29	NC_003270	TCGCT	2	10	1341	1350	0 %	40 %	20 %	40 %	Non-Coding
30	NC_003270	TTCG	2	8	1365	1372	0 %	50 %	25 %	25 %	Non-Coding
31	NC_003270	TCT	2	6	3294	3299	0 %	66.67 %	0 %	33.33 %	Non-Coding
32	NC_003270	GTT	2	6	3385	3390	0 %	66.67 %	33.33 %	0 %	Non-Coding
33	NC_003270	CTG	2	6	3856	3861	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
34	NC_003270	CAA	2	6	3912	3917	66.67 %	0 %	0 %	33.33 %	Non-Coding
35	NC_003270	TCA	2	6	3937	3942	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
36	NC_003270	ATG	2	6	4032	4037	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
37	NC_003270	CACC	2	8	4042	4049	25 %	0 %	0 %	75 %	Non-Coding
38	NC_003270	T	6	6	4094	4099	0 %	100 %	0 %	0 %	Non-Coding
39	NC_003270	AGT	2	6	4100	4105	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
40	NC_003270	GTTG	2	8	4113	4120	0 %	50 %	50 %	0 %	Non-Coding
41	NC_003270	T	8	8	4121	4128	0 %	100 %	0 %	0 %	Non-Coding
42	NC_003270	A	6	6	4147	4152	100 %	0 %	0 %	0 %	Non-Coding
43	NC_003270	T	6	6	4163	4168	0 %	100 %	0 %	0 %	Non-Coding
44	NC_003270	T	6	6	4191	4196	0 %	100 %	0 %	0 %	Non-Coding
45	NC_003270	TTA	2	6	4387	4392	33.33 %	66.67 %	0 %	0 %	Non-Coding
46	NC_003270	ATTT	2	8	4420	4427	25 %	75 %	0 %	0 %	Non-Coding
47	NC_003270	TTGT	2	8	4461	4468	0 %	75 %	25 %	0 %	Non-Coding
48	NC_003270	CTG	2	6	4494	4499	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
49	NC_003270	ACA	2	6	4507	4512	66.67 %	0 %	0 %	33.33 %	Non-Coding
50	NC_003270	CGT	2	6	4529	4534	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
51	NC_003270	GAT	2	6	4607	4612	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
52	NC_003270	TTCA	2	8	4619	4626	25 %	50 %	0 %	25 %	Non-Coding
53	NC_003270	TTG	2	6	8046	8051	0 %	66.67 %	33.33 %	0 %	Non-Coding
54	NC_003270	A	7	7	8065	8071	100 %	0 %	0 %	0 %	Non-Coding
55	NC_003270	TAT	2	6	8132	8137	33.33 %	66.67 %	0 %	0 %	Non-Coding
56	NC_003270	TTA	2	6	8255	8260	33.33 %	66.67 %	0 %	0 %	Non-Coding
57	NC_003270	AACA	2	8	8286	8293	75 %	0 %	0 %	25 %	Non-Coding
58	NC_003270	GTT	2	6	8318	8323	0 %	66.67 %	33.33 %	0 %	Non-Coding
59	NC_003270	GC	3	6	8735	8740	0 %	0 %	50 %	50 %	Non-Coding
60	NC_003270	CAT	2	6	8746	8751	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
61	NC_003270	GCA	2	6	8774	8779	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
62	NC_003270	AAT	2	6	8806	8811	66.67 %	33.33 %	0 %	0 %	Non-Coding
63	NC_003270	AGT	2	6	9893	9898	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
64	NC_003270	CCA	2	6	10611	10616	33.33 %	0 %	0 %	66.67 %	Non-Coding
65	NC_003270	TACA	2	8	10627	10634	50 %	25 %	0 %	25 %	Non-Coding
66	NC_003270	T	6	6	13915	13920	0 %	100 %	0 %	0 %	Non-Coding
67	NC_003270	CAG	2	6	13985	13990	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
68	NC_003270	ACC	2	6	14005	14010	33.33 %	0 %	0 %	66.67 %	Non-Coding
69	NC_003270	AAT	2	6	14048	14053	66.67 %	33.33 %	0 %	0 %	Non-Coding
70	NC_003270	AATA	2	8	14063	14070	75 %	25 %	0 %	0 %	Non-Coding
71	NC_003270	TAT	2	6	14077	14082	33.33 %	66.67 %	0 %	0 %	Non-Coding
72	NC_003270	GAG	2	6	14782	14787	33.33 %	0 %	66.67 %	0 %	Non-Coding
73	NC_003270	AGA	2	6	16997	17002	66.67 %	0 %	33.33 %	0 %	Non-Coding
74	NC_003270	TGC	2	6	17008	17013	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
75	NC_003270	AT	3	6	17035	17040	50 %	50 %	0 %	0 %	Non-Coding
76	NC_003270	ACC	2	6	19099	19104	33.33 %	0 %	0 %	66.67 %	Non-Coding
77	NC_003270	CA	3	6	19109	19114	50 %	0 %	0 %	50 %	Non-Coding
78	NC_003270	T	6	6	20756	20761	0 %	100 %	0 %	0 %	Non-Coding
79	NC_003270	TAA	2	6	20797	20802	66.67 %	33.33 %	0 %	0 %	Non-Coding
80	NC_003270	ATT	2	6	24829	24834	33.33 %	66.67 %	0 %	0 %	Non-Coding
81	NC_003270	TAT	2	6	24838	24843	33.33 %	66.67 %	0 %	0 %	Non-Coding
82	NC_003270	ACT	2	6	25896	25901	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
83	NC_003270	ATA	2	6	25911	25916	66.67 %	33.33 %	0 %	0 %	Non-Coding
84	NC_003270	TCA	2	6	25934	25939	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
85	NC_003270	TGCCCA	2	12	26129	26140	16.67 %	16.67 %	16.67 %	50 %	Non-Coding
86	NC_003270	ATGA	2	8	26145	26152	50 %	25 %	25 %	0 %	Non-Coding
87	NC_003270	TAAT	2	8	26186	26193	50 %	50 %	0 %	0 %	Non-Coding
88	NC_003270	CACAT	2	10	26194	26203	40 %	20 %	0 %	40 %	Non-Coding
89	NC_003270	T	7	7	26230	26236	0 %	100 %	0 %	0 %	Non-Coding
90	NC_003270	AAT	2	6	26301	26306	66.67 %	33.33 %	0 %	0 %	Non-Coding
91	NC_003270	TAA	2	6	26322	26327	66.67 %	33.33 %	0 %	0 %	Non-Coding
92	NC_003270	A	6	6	26326	26331	100 %	0 %	0 %	0 %	Non-Coding
93	NC_003270	A	7	7	29265	29271	100 %	0 %	0 %	0 %	Non-Coding
94	NC_003270	ATT	2	6	29274	29279	33.33 %	66.67 %	0 %	0 %	Non-Coding
95	NC_003270	AAT	2	6	29280	29285	66.67 %	33.33 %	0 %	0 %	Non-Coding
96	NC_003270	GAA	2	6	29328	29333	66.67 %	0 %	33.33 %	0 %	Non-Coding
97	NC_003270	TA	3	6	29388	29393	50 %	50 %	0 %	0 %	Non-Coding
98	NC_003270	A	6	6	29405	29410	100 %	0 %	0 %	0 %	Non-Coding
99	NC_003270	CTT	2	6	29477	29482	0 %	66.67 %	0 %	33.33 %	Non-Coding
100	NC_003270	ATA	2	6	29602	29607	66.67 %	33.33 %	0 %	0 %	Non-Coding
101	NC_003270	GTTC	2	8	29618	29625	0 %	50 %	25 %	25 %	Non-Coding
102	NC_003270	TAA	2	6	29678	29683	66.67 %	33.33 %	0 %	0 %	Non-Coding
103	NC_003270	TTAT	2	8	29756	29763	25 %	75 %	0 %	0 %	Non-Coding
104	NC_003270	CAA	2	6	29788	29793	66.67 %	0 %	0 %	33.33 %	Non-Coding
105	NC_003270	TG	3	6	30149	30154	0 %	50 %	50 %	0 %	Non-Coding
106	NC_003270	TA	4	8	30187	30194	50 %	50 %	0 %	0 %	Non-Coding
107	NC_003270	T	6	6	30204	30209	0 %	100 %	0 %	0 %	Non-Coding
108	NC_003270	TAA	2	6	30263	30268	66.67 %	33.33 %	0 %	0 %	Non-Coding
109	NC_003270	CT	3	6	30281	30286	0 %	50 %	0 %	50 %	Non-Coding
110	NC_003270	GAG	2	6	30318	30323	33.33 %	0 %	66.67 %	0 %	Non-Coding
111	NC_003270	T	6	6	30335	30340	0 %	100 %	0 %	0 %	Non-Coding
112	NC_003270	GAAA	2	8	30359	30366	75 %	0 %	25 %	0 %	Non-Coding
113	NC_003270	ATC	2	6	30374	30379	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
114	NC_003270	CTA	2	6	30437	30442	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
115	NC_003270	TC	3	6	30551	30556	0 %	50 %	0 %	50 %	Non-Coding
116	NC_003270	TTG	2	6	30833	30838	0 %	66.67 %	33.33 %	0 %	Non-Coding
117	NC_003270	GGTATT	2	12	31010	31021	16.67 %	50 %	33.33 %	0 %	Non-Coding
118	NC_003270	GTTT	2	8	31106	31113	0 %	75 %	25 %	0 %	Non-Coding
119	NC_003270	TGT	2	6	31204	31209	0 %	66.67 %	33.33 %	0 %	Non-Coding
120	NC_003270	TAT	2	6	31240	31245	33.33 %	66.67 %	0 %	0 %	Non-Coding
121	NC_003270	AGATAA	2	12	32975	32986	66.67 %	16.67 %	16.67 %	0 %	Non-Coding
122	NC_003270	TTA	2	6	32998	33003	33.33 %	66.67 %	0 %	0 %	Non-Coding
123	NC_003270	CAAG	2	8	33036	33043	50 %	0 %	25 %	25 %	Non-Coding
124	NC_003270	CG	3	6	33086	33091	0 %	0 %	50 %	50 %	Non-Coding
125	NC_003270	GCA	2	6	33134	33139	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
126	NC_003270	TAA	2	6	33143	33148	66.67 %	33.33 %	0 %	0 %	Non-Coding
127	NC_003270	CGG	2	6	33284	33289	0 %	0 %	66.67 %	33.33 %	Non-Coding
128	NC_003270	TC	3	6	33324	33329	0 %	50 %	0 %	50 %	Non-Coding
129	NC_003270	GA	3	6	33343	33348	50 %	0 %	50 %	0 %	Non-Coding
130	NC_003270	A	7	7	33348	33354	100 %	0 %	0 %	0 %	Non-Coding
131	NC_003270	TTAG	2	8	33356	33363	25 %	50 %	25 %	0 %	Non-Coding
132	NC_003270	AAT	2	6	33371	33376	66.67 %	33.33 %	0 %	0 %	Non-Coding
133	NC_003270	AGA	2	6	33386	33391	66.67 %	0 %	33.33 %	0 %	Non-Coding
134	NC_003270	ATA	2	6	35068	35073	66.67 %	33.33 %	0 %	0 %	Non-Coding
135	NC_003270	ATA	2	6	35768	35773	66.67 %	33.33 %	0 %	0 %	Non-Coding
136	NC_003270	T	7	7	35813	35819	0 %	100 %	0 %	0 %	Non-Coding
137	NC_003270	AT	3	6	35822	35827	50 %	50 %	0 %	0 %	Non-Coding
138	NC_003270	TGTT	2	8	35833	35840	0 %	75 %	25 %	0 %	Non-Coding
139	NC_003270	CTA	2	6	35847	35852	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
140	NC_003270	ATT	2	6	35859	35864	33.33 %	66.67 %	0 %	0 %	Non-Coding
141	NC_003270	CTAG	2	8	37624	37631	25 %	25 %	25 %	25 %	Non-Coding
142	NC_003270	GAAAA	2	10	37632	37641	80 %	0 %	20 %	0 %	Non-Coding
143	NC_003270	TCA	2	6	38767	38772	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
144	NC_003270	ATT	2	6	38833	38838	33.33 %	66.67 %	0 %	0 %	Non-Coding
145	NC_003270	AT	3	6	38918	38923	50 %	50 %	0 %	0 %	Non-Coding
146	NC_003270	TAC	2	6	38936	38941	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
147	NC_003270	CT	3	6	38948	38953	0 %	50 %	0 %	50 %	Non-Coding
148	NC_003270	CTA	2	6	38985	38990	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
149	NC_003270	ATT	2	6	39473	39478	33.33 %	66.67 %	0 %	0 %	Non-Coding
150	NC_003270	ATG	2	6	39486	39491	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
151	NC_003270	TGT	2	6	39496	39501	0 %	66.67 %	33.33 %	0 %	Non-Coding
152	NC_003270	GAA	2	6	39563	39568	66.67 %	0 %	33.33 %	0 %	Non-Coding
153	NC_003270	T	6	6	39574	39579	0 %	100 %	0 %	0 %	Non-Coding
154	NC_003270	T	6	6	39589	39594	0 %	100 %	0 %	0 %	Non-Coding
155	NC_003270	TAGCTT	2	12	39712	39723	16.67 %	50 %	16.67 %	16.67 %	Non-Coding
156	NC_003270	A	6	6	39735	39740	100 %	0 %	0 %	0 %	Non-Coding
157	NC_003270	TC	3	6	39825	39830	0 %	50 %	0 %	50 %	Non-Coding
158	NC_003270	TACT	2	8	39851	39858	25 %	50 %	0 %	25 %	Non-Coding
159	NC_003270	T	7	7	39872	39878	0 %	100 %	0 %	0 %	Non-Coding
160	NC_003270	AAG	2	6	39972	39977	66.67 %	0 %	33.33 %	0 %	Non-Coding
161	NC_003270	A	7	7	40008	40014	100 %	0 %	0 %	0 %	Non-Coding
162	NC_003270	ATA	2	6	40087	40092	66.67 %	33.33 %	0 %	0 %	Non-Coding
163	NC_003270	T	7	7	40121	40127	0 %	100 %	0 %	0 %	Non-Coding
164	NC_003270	GAT	2	6	40158	40163	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
165	NC_003270	TTTC	2	8	40165	40172	0 %	75 %	0 %	25 %	Non-Coding
166	NC_003270	ATT	2	6	40187	40192	33.33 %	66.67 %	0 %	0 %	Non-Coding
167	NC_003270	TTG	2	6	40212	40217	0 %	66.67 %	33.33 %	0 %	Non-Coding
168	NC_003270	AGT	2	6	40239	40244	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
169	NC_003270	CAG	2	6	40274	40279	33.33 %	0 %	33.33 %	33.33 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.